Pumpkin Protein Muffins

If you’re craving a cozy, fall-inspired snack that’s also packed with protein, these Pumpkin Protein Muffins are a must-try! Soft, fluffy, and perfectly spiced, they’re a healthier alternative to traditional muffins. Whether you enjoy them for breakfast, post-workout fuel, or a guilt-free dessert, this recipe delivers the perfect balance of flavor and nutrition.

At a Glance

  • Servings: 12 muffins
  • Prep Time: 10 minutes
  • Cook Time: 20 minutes
  • Total Time: 30 minutes
  • Difficulty: Easy
  • Estimated Cost: $8–$10

Ingredients

Ingredients for pumpkin protein muffins including pumpkin puree, oat flour, vanilla protein powder, eggs, maple syrup, and spices on a counter
Everything you need to make fluffy pumpkin protein muffins, measured and ready.
  • 1 cup (240 g) canned pumpkin puree (not pumpkin pie filling)
  • 2 large eggs
  • ½ cup (120 ml) unsweetened almond milk (or regular milk)
  • ¼ cup (60 ml) maple syrup or honey
  • 1 tsp vanilla extract
  • 1 ½ cups (150 g) oat flour (or blend rolled oats in a blender)
  • 1 scoop (30 g) vanilla protein powder (whey or plant-based)
  • 1 tsp baking powder
  • ½ tsp baking soda
  • 2 tsp pumpkin pie spice (or mix cinnamon, nutmeg, ginger, and cloves)
  • Pinch of salt
  • Optional add-ins: ¼ cup mini chocolate chips, chopped nuts, or dried cranberries

Ingredient Notes & Swaps:

  • Protein powder: Use a neutral or vanilla flavor for best results.
  • Sweetener: Swap maple syrup with honey or a sugar-free syrup for fewer carbs.
  • Milk: Any non-dairy milk works if you want this recipe dairy-free.

Step-by-Step Instructions

  1. Preheat & Prep: Preheat your oven to 350°F (175°C). Line a muffin tin with paper liners or spray with nonstick cooking spray.
  2. Mix Wet Ingredients: In a large mixing bowl, whisk together pumpkin puree, eggs, almond milk, maple syrup, and vanilla until smooth.
Whisking pumpkin puree, eggs, almond milk, maple syrup, and vanilla in a bowl for pumpkin protein muffins
Step 1: Whisk the wet ingredients until smooth.
  1. Combine Dry Ingredients: In a separate bowl, stir together oat flour, protein powder, baking powder, baking soda, pumpkin pie spice, and salt.
  2. Make the Batter: Slowly add the dry ingredients to the wet mixture, stirring until just combined. Do not overmix. Fold in optional add-ins if desired.
Stirring oat flour, vanilla protein powder, baking powder, baking soda, pumpkin pie spice, and salt in a bowl
Step 2: Combine the dry ingredients.
  1. Fill Muffin Tin: Divide the batter evenly among the muffin cups, filling each about ¾ full.
Spoonfuls of pumpkin protein muffin batter going into a lined muffin tin
Step 3: Portion the batter into the muffin tin.
  1. Bake: Bake for 18–22 minutes, or until a toothpick inserted into the center comes out clean.
  2. Cool & Enjoy: Let muffins cool in the pan for 5 minutes, then transfer to a wire rack. Enjoy warm or at room temperature.

Pro Tips & Variations

  • For extra moisture, add 2 tbsp of Greek yogurt to the batter.
  • Make them nutty by mixing in chopped walnuts or pecans.
  • For a chocolatey version, use chocolate protein powder and add cocoa powder.
  • Freeze extras in a zip-top bag for easy grab-and-go snacks.

Serving Suggestions

Golden pumpkin protein muffins on a wooden board, one cut open to show fluffy texture
Soft, fluffy pumpkin protein muffins perfect for breakfast or snacks.
  • Enjoy warm with a smear of almond butter.
  • Pair with Greek yogurt and fresh fruit for a protein-packed breakfast.
  • Pack one in your lunchbox as a healthy midday pick-me-up.

Storage & Reheating

  • Room Temperature: Store in an airtight container up to 3 days.
  • Fridge: Keeps well up to 1 week.
  • Freezer: Freeze for up to 3 months. Thaw overnight in the fridge or microwave for 30 seconds.

Troubleshooting

  • Muffins too dry? Check protein powder type some absorb more liquid. Add an extra splash of milk.
  • Didn’t rise well? Make sure your baking powder and soda are fresh.
  • Too dense? Don’t overmix the batter gentle folding keeps muffins fluffy.

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